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University of Iowa Launches Brain Imaging Study

Published on Thu, 03/10/2016

The University of Iowa’s DM1 Brain Imaging Research Group is excited to announce that its study (previously in a pilot phase of data collection) has been awarded a grant by the National Institute of Neurological Disorders and Stroke (NINDS), a division of the National Institutes of Health (NIH), to fund a 3-year longitudinal study of adults with a family history of DM1. 

This study seeks to identify, measure and track over time common symptoms and changes in the brain that may be happening to individuals living with DM1 and those at risk for DM1. 

The study is looking for adults aged 18 through 65 years old and living in the US who either:

1)    Have been diagnosed with DM1 after the age of 21 OR
2)    Have not been diagnosed with DM1 but have a family history of DM1 (i.e. are “at-risk” for developing DM1)

Research participants will be invited to come to the University of Iowa, located in Iowa City, Iowa, for three yearly study visits, each lasting about 8 hours. Study participants will be compensated for their time and travel.  

Eligible persons interested in participating should contact Stephen Cross, the Research Associate for this study, directly at (319) 384-9391 or email. Learn more about research trials and studies, and read about Dr. Ian DeVolver's study on the brain

Research Fellow Profile: Dr. Ian DeVolder

Published on Fri, 03/04/2016

MDF has awarded a 2016-2017 postdoctoral fellowship to Dr. Ian DeVolder, Ph.D., a Graduate Research Assistant in the Department of Psychiatry at the University of Iowa Carver College of Medicine. 

Dr. DeVolder’s research proposal is titled “Structural and Functional Connectivity in the Brains of Patients with Adult- and Late-Onset Myotonic Dystrophy Type 1 (DM1): A Potential Biomarker for Disease Progression.” In this study, Dr. DeVolder and his colleagues will evaluate brain structure and function in DM1 and correlate these with measures such as neurocognitive functioning and disease duration. The investigators will study 30 patients with classic adult-onset or with late-onset DM1, ages 21 to 65 years old, and compare them to 30 age-matched healthy controls. 

Dr. DeVolder received his doctorate in neuroscience from the University of Iowa in 2015 and is a graduate research assistant in the laboratory of Peg Nopoulos, M.D., at the University of Iowa Carver College of Medicine. His work at Iowa has focused on the structure and function of the brain in children with clefts of the lip or palate and in children at risk for Huntington’s disease.

“If we can know how and when myotonic dystrophy type 1 affects the brain,” DeVolder says, “we can better time treatment so as to have a neuroprotective effect and try to prevent these brain changes from happening in the first place.” We recently talked with Dr. DeVolder to learn more:

MDF: Your previous work was focused mainly on the brain abnormalities that can accompany clefting disorders, such as cleft lip and cleft palate. [See DeVolder, I., et al., Abnormal cerebellar structure is dependent on the phenotype of isolated cleft of the lip and/or palate, The Cerebellum, April 2013.] How did you move from there into myotonic dystrophy?

ID: It’s definitely been a shift in terms of the clinical population that I’ve been working with. Clefting abnormalities and myotonic dystrophy are not directly related. However, in terms of the basic practice, the basic study we did, they’re actually not that far removed. It’s the same type of imaging techniques, the same type of neuropsychological evaluation.

And, even though my thesis work was with the clefting community, I actually have had a large role in a number of different studies in my lab. Importantly, one of those was our study on Huntington’s disease, which can be thought of as a sister disease to myotonic dystrophy. They’re both trinucleotide repeat disorders, and both previously were thought of as primarily neuromuscular diseases. 

The Huntington’s study was focused on children who were at risk for developing HD. These children had either a parent or grandparent who was affected by the disease. We did a full neuropsychological evaluation, MRI and genetic testing. We were comparing children with the expanded repeat, who, in 30 years or so, will likely develop HD, with those who don’t have the expanded repeat. We were looking at Huntington’s from a developmental perspective to see whether, at an early age, there is something being set in motion in terms of neurodevelopmental changes. Results from this study should start being published within the coming year.

It’s been an interesting shift into myotonic dystrophy. We wanted to model our DM1 study after our Huntington’s study, looking at kids who were not yet showing symptoms but who were at risk for DM1. But we underestimated the role of anticipation in DM1. This is a phenomenon that is seen in Huntington’s but not nearly as frequently and not nearly as severely as in myotonic dystrophy.

We discovered that families with DM1 oftentimes don’t know that they have it or that their children are at risk until they have a child that’s born with an extremely expanded repeat and the congenital-onset or childhood-onset form of the disease. So it’s much harder to identify children with pre-DM1 than children with pre-HD. Therefore, we shifted our focus to adult-onset  and late-onset myotonic dystrophy.

There have been some neuroimaging studies in myotonic dystrophy, but they’ve typically focused on the childhood-onset, adult-onset and congenital-onset forms all together in one group.

We really wanted to focus on one type of DM1, because the congenital-onset and childhood-onset forms seem to be so different in terms of the symptoms they show. We wanted to completely remove that confounding factor. We’re looking at a pretty big age range – 21 to 65 – but it’s still adult-onset DM1. We cut off the age for this study at 65 because we didn’t want to introduce aging effects as confounding factors.

We’re combining concepts from a lot of previous neuroimaging studies. We’re using several neuroimaging techniques and we’re combining those with a neuropsychological evaluation. We’re also making it a longitudinal study, where participants will come back once a year for three years. The study is unique in that sense. It’s the first neuroimaging study in DM1 to combine all of these elements.

MDF: What kinds of brain abnormalities are you looking for?

ID: The brain changes in myotonic dystrophy have been primarily found to be white matter-related. We expect to find some of the things that have already been seen, such as increased numbers of white matter hyperintensity lesions. White matter refers to the myelinated fibers that connect different regions of the brain, and there are variants that you can see on an MRI scan. They’re a little bit unclassified, but basically they’re considered to be abnormal white matter.

We’re also using diffusion imaging, which looks even more specifically at white matter structural integrity. Diffusion imaging measures the movement of water molecules in tissues. It’s a way to see if water is moving along the axon versus going out. From that we can get an idea of the actual shape and structure of the white matter. Typically, white matter in the brain forms tight fiber bundles and tracts, so healthier and better-myelinated white matter would lead to an increase in water movement along the axons, rather than out into the brain. This can be measured by diffusion imaging.

There’s been a fair amount of neuroimaging work in myotonic dystrophy, but there’s been hardly any functional neuroimaging. That’s something I’ve worked with in our studies and something I’ve really wanted to focus on for this population as well.

I was really excited and somewhat surprised when I saw the 2014 paper on functional brain connectivity in DM1. [See Serra, L., et al., Abnormal functional brain connectivity and personality traits in myotonic dystrophy type 1, JAMA Neurology, May 2014.]

They found that in patients with DM1 there was increased functional connectivity in certain parts of the brain compared to the control group. Specifically, they found increased network connectivity between the left and right posterior cingulate cortex and the left parietal node when the participant was in a resting state – in other words, not engaged in any specific task. They also found that the DM1 group was more likely to show certain personality traits, such as the presence of fixed ideas, rigidity of thought, and an acute sensitivity to anger or hostility in others, than the control group.

In our study, we’re looking at the resting state, and we’re looking at functional connectivity, but we’re also looking at the developmental component, whether these networks are changing over time and with disease duration.

In resting-state functional connectivity analyses, we’re examining low-level changes in blood flow throughout the brain. You can look at the time course of these blood-flow changes at each individual voxel [volume element] in the brain, and then can compare that time course to all other voxels of the brain. From this you can discover areas of the brain that are showing the same levels of blood-flow changes, with the idea being that those areas that are functionally connected to each other would show a more similar type of pattern to each other in terms of blood-flow. With this data we can examine functional networks in the brain, and how they may be changing in DM1.

In some of the questionnaires that we’re administering, we’re also looking for personality traits that may be typical. We’ll see whether or not we capture the same types of findings as the 2014 study.

MDF: If you do find brain abnormalities, are they necessarily the cause of the cognitive and personality differences sometimes seen in DM1? Could it be that focus on certain thoughts or activities could change the brain? Or could it be that respiratory or cardiac impairment associated with DM1 affect the brain?

ID: I think that if there’s a common pattern of brain abnormalities seen in a population, I would argue that it’s more neurobiologically based rather than the other way around. But it’s a hard thing to parse out. 

In another part of your question, you asked about whether what we’re seeing might not be primary but secondary to some of the respiratory or cardiac issues. It’s an issue that we’ve run into, particularly in the clefting studies that I’ve been involved in. 

A fair critique of that study is that some of the changes we measured may actually be secondary, a response to the things these kids experience at really young ages – like anesthesia during reparative surgeries when they’re not even one year old yet. They are facing these environmental insults at this critical developmental time point. It’s a potential caveat to some of our studies.

I think with myotonic dystrophy it won’t be quite as big an issue. In our screening process, we automatically exclude individuals who have a pacemaker installed, because they can’t go into the MRI scanner. As a result, I think those individuals who would be the most severely affected in terms of the cardiorespiratory symptoms are automatically being excluded from the study.

I think it’s going to be more reasonable in this study to really try and parse out the abnormalities that are directly caused by the gene expansion as opposed to other factors.

Also, we do get a pretty extensive medical history from all our study participants, so potentially we could create within the myotonic dystrophy group some separate subgroups, such as those that are most severely affected by arrhythmias, and see whether or not we are getting the same patterns of brain changes.

MDF: Would finding brain abnormalities in study participants with DM1 have therapeutic implications?

ID: We’re focusing on the longitudinal aspect in these studies. What we’re hoping to find is essentially biomarkers for the disease. These do have important therapeutic implications, but they’re not going to be immediately obvious. 

As for the current drug trials that are going on with Ionis, they potentially could have a lot of therapeutic benefit. However, the drug they’re testing cannot cross the blood-brain barrier unless delivered intrathecally -- via spinal infusion. Right now, the potential drug treatments, which are delivered subcutaneously, won’t actually get into the central nervous system. [Ionis Pharmaceuticals is testing its antisense-based drug IONIS-DMPK-2.5Rx, which targets the abnormally expanded RNA from the DMPK gene in DM1.]

The thing is, we don’t have a good idea of the developmental component of the brain abnormalities in terms of the disease progression itself. Before drug discovery can start moving into that area, we have to know what’s actually happening in the brain. If we can get a better idea of when these changes are occurring and what the changes actually are, we can track disease progression much better, potentially having much better timing of when drug delivery should happen. With optimal timing of drug delivery, these drugs could have a neuroprotective effect and ideally prevent these brain changes before they happen.

MDF: Is your study still open to recruitment?

ID: The study is well under way, but yes, it’s still open. We will continue to recruit new participants over the next few years.

Note: For details about this and other DM studies, go to MDF’s Study and Trial Resource Center and select the Current Studies and Trials tab. The study discussed in this article is Brain Structure and Function in Adults with a Family History of DM1.

University of Florida - Sanofi Collaboration Receives DM Drug Screening Grant

Published on Fri, 03/04/2016

In a collaboration with pharmaceutical company Sanofi-Aventis, University of Florida investigators Dr. Andrew Berglund, Dr. Eric Wang and Dr. Kausiki Datta have been awarded $200,000 by MDF to screen for new drugs to treat DM1 and DM2.

The group will first optimize an assay designed to identify compounds that inhibit the transcription of the repeats in the DM1 and/or DM2 genes, and then will work with Sanofi to conduct a high throughput screen to identify drug candidates. By targeting transcription of the repeats, the group hopes that a variety of potential downstream toxic effects will be corrected, from protein sequestration to improper signaling to protein production through RNA translation.

This work builds on a previous discovery by Dr. Berglund and colleagues that the antibiotic Actinomycin D can block transcription of CUG repeats at nanomolar concentrations.

Reference:

Actinomycin D Specifically Reduces Expanded CUG Repeat RNA in Myotonic Dystrophy Models.
Siboni RB, Nakamori M, Wagner SD, Struck AJ, Coonrod LA, Harriott SA, Cass DM, Tanner MK, and Berglund JA.
Cell Rep. 2015 December 22. 

 

Multi-Disciplinary Approach Needed for Congenital and Childhood DM Care

Published on Thu, 02/11/2016

Poor communication, fatigue and gastrointestinal problems worry parents most.

Dr. Nicholas Johnson at the University of Utah and colleagues released the results of an MDF-funded multinational study on the impact of congenital myotonic dystrophy (CDM). The study relied upon a survey filled out by 150 American, Canadian and Swedish parents to better understand both the frequency and the impact of symptoms in children with different repeat lengths and different types of CDM. The survey inquired about 325 symptoms of importance and 20 “symptomatic themes.” Children in the study were divided into three groups: congenital DM (CDM), with symptom onset at birth; childhood onset DM (ChDM), with symptoms starting between ages one and ten; and juvenile onset DM (JDM), with symptoms starting after age 10 but before age 18.

Frequency of Symptoms

Parents reported that communication issues (81%), problems with hands or fingers (79.6%) and fatigue (78.6%) were the most common symptomatic themes across all children in the study, while the most common individual symptoms were hand weakness, difficulty opening jars or bottles and learning difficulties. The investigators also examined the influence of repeat length and age on both symptom themes and individual symptoms. Many symptom themes were found to be more common as children became older, such as hand or finger problems, emotional issues, fatigue, pain, inability to do activities, myotonia, gastrointestinal issues and social issues. Children with higher repeat counts showed increased frequency of leg and trunk weakness and problems with bowel control, although myotonia was less frequent in children with higher repeat counts. Interestingly, emotional issues, changes in body image, social issues and impaired sleep were more common when the mutation was inherited from the father.

Impact of Symptoms

The authors looked at the impact of symptoms on children in two ways: first they analyzed the impact of symptoms for the individual, then they analyzed the impact of symptoms for all children with congenital or childhood myotonic dystrophy—the “population impact”— by multiplying the individual impact by the frequency of the symptom. The symptom themes that parents reported had the greatest impact on their individual children’s lives were gastrointestinal issues, problems with urinary or bowel control and decreased performance in social situations. The authors make the point that these symptom themes are different from those identified by adults with DM, namely fatigue and mobility and activity limitations (DM2 patients identified fatigue and other disease symptoms as having the greatest impact on daily living in an article published by MDF in Decmber 2015). Parents of children with greater repeat lengths reported a higher life impact for leg weakness and parents of children who inherited the mutation from their fathers reported a higher life impact for pain. The symptom themes with the greatest population impact were found to be communication issues, fatigue and gastrointestinal issues. The specific symptoms with the greatest population impact were learning difficulties, reliance on family members, and difficulty with math.

Additional Factors

From a social standpoint, many children required special assistance in school, such as speech therapy (55.3%), occupational therapy (40.7%), physical therapy (35.3%), smaller class size (42.7%), test modifications (42%), and augmentative speech methods (19.2%). The survey also showed that children with DM1 who are now adults have difficulty in getting jobs. Parents reported that 15.8% of children had anesthesia complications (56.8% reported no problems and 27.4% had never had anesthesia), and 24.1% had cardiac arrhythmias. Finally, the rate of intellectual disability in children in the study was 28.3% - 45.8% compared to 0.71% in the general population. In particular, children in the study had higher rates of autism spectrum disorder (ASD) and attention deficit hyperactivity disorder.

Take Home Messages

The authors conclude by noting that the high rate of communication problems should be addressed with early referrals for speech therapy and that early cardiac monitoring should be performed. Also, the rate of anesthesia complications reinforces the need for special attention in this group. Overall, the authors emphasize that the high frequency of social and cognitive issues associated with the disease make the need for a multi-disciplinary approach to care much more important.

The Impact of Pregnancy on Myotonic Dystrophy: A Registry-Based Study

Published on Thu, 02/11/2016

Dr. Nicholas Johnson and a research team from the Universities of Utah and Rochester partnered on a study commissioned by MDF to study how women with myotonic dystrophy (DM) are impacted by pregnancy. Data for the study were drawn from the Myotonic Dystrophy Family Registry and the National Registry for DM and FSHD. Previous studies have shown that women with DM may have pregnancy complications in excess of what is normally seen in women without DM. For example, pregnant women with DM1 experience more spontaneous abortions, polyhydramnios (excess amniotic fluid), ectopic pregnancies (fertilized egg implants outside the uterus), placenta previa (placenta covers the cervix) and early labor. Other studies focusing on DM2 showed that 21% of women with DM2 had their first symptom during pregnancy, and women with DM2 experienced more urinary tract infections and preterm labor.

This new study recruited 152 women from the two registries and collected data on their 375 pregnancies. Women with DM1 and DM2 had miscarriage rates of 32% and 37%, respectively, which is higher than the national average of 17%. All women with DM combined had a 10% rate of preeclampsia (high blood pressure and protein in urine) and a 14% rate of peripartum hemorrhage (bleeding before, during or after delivery), both of which are well above the national average of 3%. Many common symptoms of DM progressed during pregnancy, including mobility limitations, activity limitations, pain, emotional issues and myotonia. After delivery many of these symptoms reportedly did not return to the level experienced before pregnancy.

The authors summarize their findings by suggesting that “this research may be utilized by DM patients and family members seeking to better understand the risks and outcomes associated with pregnancy and DM.”

Reference:

The Impact of Pregnancy on Myotonic Dystrophy: A Registry-Based Study.
Johnson NE, Hung, M, Nasser, E, Hagerman, KA, Chen, W, Ciafaloni, E, and Heatwole, CR.
Journal of Neuromuscular Diseases. Oct 7, 2015.

Myotonic Dystrophy Anesthesia Guidelines

Published on Thu, 01/28/2016

Myotonic Dystrophy Anesthesia Guidelines

Please know that the use of anesthesia raises special risks to those living with myotonic dystrophy (DM), as the disease results in heightened sensitivity to sedatives and analgesics. Pay particular attention to the serious complications that can arise in the post-anesthesia period, when risk of aspiration and other complications increase. 

MDF has published two versions of its Anesthesia Guidelines:

  • A one-page summary of the anesthesia guidelines to share with your clinician and anesthesiologist.
  • The complete "Practical Suggestions for the Anesthetic Management of a Myotonic Dystrophy Patient".

Download an electronic copy of the latest versions of both documents on the Toolkits & Publications page.

New to DM? Click here for more information.

Common Symptoms of DM2 and Their Impact on Daily Living

Published on Wed, 12/02/2015

While symptom themes such as inability to do activities, mobility limitations and weakness were the most common, fatigue was the symptom that had the greatest impact on patients' lives. This research will help focus developing treatment strategies on the most important issues reported by people with DM2.

These findings are similar to those from a previous study from the same authors that examined symptoms in DM1, where fatigue was also ranked as the most burdensome symptom but not the most common.

More on the study:

In this study, researchers interviewed and sent surveys to people across the USA with DM2, asking respondents to report what symptoms they were experiencing, and what impact those symptoms had on their daily living.

Symptoms were grouped into themes, and researchers found that the most commonly reported symptom themes were:

  • Inability to do activities (94%)
  • Limitations with mobility or walking (89%)
  • Hip, thigh, or knee weakness (89%)
  • Fatigue (89%)
  • Myotonia (83%)
  • Pain (80%)

When the themes were broken down into individual symptoms, the most commonly experienced symptoms included difficulties getting up from the floor, squatting, walking hills, rising from a seated position, and other issues stemming from leg weakness.  These symptoms were experienced by at least 97% of the respondents.

Aside from assessing symptoms, this study also gathered information on employment, age, duration of symptoms, and gender. This allowed the researchers to break down their DM2 respondents into groups to determine whether there were any subsets of the population that had a different experience with DM2 than others.

They found that the significant differences between subsets of the population came when patients were grouped by employment status. Unemployed respondents more commonly reported mobility or walking issues, problems with shoulders or arms, emotional issues, decreased satisfaction in social situations, and many other symptomatic themes.

The researchers believe that “employment status is highly dependent on a patient’s overall disease burden,” and also found that employed respondents had better satisfaction in social situations. While this study was not designed to determine cause and effect, the authors hypothesize that many symptoms of DM2 may make obtaining employment difficult or impossible. They further hypothesize that unemployment may also potentially lead to increased disease burden in DM2.

To read an abstract of this article, click here

MDF SAC Member Profile: Dr. Kathie Bishop

Published on Wed, 12/02/2015

MDF is pleased to welcome Dr. Kathie Bishop, Ph.D., to its Scientific Advisory Committee(SAC). Dr. Bishop, who joined the SAC in summer 2015, is a seasoned expert in neurological and neuromuscular research and drug development.

She received her Ph.D. in neurosciences from the University of Alberta (Canada) in 1997 and then completed a postdoctoral fellowship in molecular neurobiology at the Salk Institute in La Jolla, Calif.

From 2001 to 2009, Dr. Bishop was at Ceregene, a San Diego biotechnology company developing gene therapies for neurological disorders. At Ceregene, where she was Director of Research and Development, she worked on preclinical and clinical programs in Alzheimer’s disease, Parkinson’s disease, Huntington’s disease, retinal degenerations, and amyotrophic lateral sclerosis (ALS).

In 2009, Dr. Bishop moved to Ionis (formerly Isis) Pharmaceuticals in Carlsbad, Calif., a biotech company specializing in antisense oligonucleotide-based therapeutics. While at Ionis, she led programs within the neurology franchise, including leading development for programs for spinal muscular atrophy, amyotrophic lateral sclerosis, type 1 myotonic dystrophy (DM1), and other rare genetic neurological disorders. She left Ionis Pharmaceuticals in 2015, as Vice President of Clinical Development.

She is now Chief Scientific Officer at Tioga Pharmaceuticals, a San Diego biotechnology company developing treatments for chronic pruritus. We talked with Dr. Bishop in October 2015:

MDF: What prompted your decision to move from academia to industry?

KB: I’ve always been interested in genetic neurologic diseases. My original degree was in genetics, and my Ph.D. is in neuroscience. While at the Salk Institute for my postdoctoral fellowship, I worked on development of the brain and spinal cord and found I wanted to apply the science to drug discovery and development.

MDF: What kinds of drug development programs have you worked on?

KB: At Ceregene, we were developing gene therapies for Alzheimer’s disease, Parkinson’s disease, Huntington’s disease, and ALS [amyotrophic lateral sclerosis].

When I moved to Ionis, my first program was developing antisense against SOD1 for ALS. We did a phase 1 clinical trial administering IONIS-SOD1Rx into the CSF [cerebrospinal fluid] in patients with the genetic form of ALS, and no safety issues were found. [See Miller et al., Lancet Neurology, May 2013.] At the time, we were concentrating on whether the CSF delivery of antisense drugs would be feasible and safe, which it was

I led the SMA [spinal muscular atrophy] program at Ionis from the preclinical stage through the phase 1 and phase 2 trials and up to trial design and initiation of phase 3 studies. IONIS-SMNRx acts on the SMN2 gene to change SMN2 splicing so that a functional protein is made. It acts right on the disease mechanism. This antisense [ASO] drug is the same chemistry as IONIS-SOD1Rx, but it doesn’t downregulate the SMN protein the way IONIS-SOD1Rx downregulates the SOD1 protein. The ASO doesn’t have a gap for an enzyme to bind that would downregulate the SMN RNA. It’s now in phase 3 studies in infants and in children with SMA.

I was also involved with developing IONIS-DMPKRx, an ASO against the DMPK RNA to treat type 1 myotonic dystrophy [DM1]. We completed a phase 1, single-dose study in healthy volunteers, and a multiple-dose study in adults with DM1 is ongoing. IONIS-DMPKRx destroys the DMPK RNA, which is thought to be the cause of DM1. It also affects the wild-type DMPK allele, but it may have a preference for the [abnormally expanded] DMPK RNA that’s stuck in the nucleus.

MDF: Do you see other therapeutic avenues for DM?

KB: Yes, absolutely. I think any one therapy, even one which acts on the genetic mechanism in DM, might not work perfectly in longstanding disease and might not work on all aspects of the disease or in all patients. We may need other compounds, such as muscle-enhancing drugs, to supplement it and be taken together with it. We will also need additional drugs that work on other aspects of DM, such as drugs that help stop degeneration in smooth muscle and heart, as well as CNS [central nervous system] drugs. Antisense drugs such as IONIS-DMPKRx do not penetrate into the CNS when given systemically, and particularly in the congenital and juvenile-onset forms of the disease, the CNS effects need treatment.

MDF: What do you see as the main challenges to drug development for DM and other rare disorders? For example, how can small companies meet the demands of patients for expanded access to compounds in development while pursuing full regulatory approval for these compounds?

KB: I think it’s the responsibility of people like me, who work in drug development, and of drug companies to communicate effectively about the development process and the risks involved to patients, their families, and their caregivers. We have to make it clear that experimental treatments could be harmful, and we have to be realistic and honest about the potential benefits. There is a lot of hope, but we also need to communicate better with the patient community about the drug development process.

That said, I would like to see the drug approval process be more efficient and go faster for diseases where the drug has a clear mechanism that acts directly on the underlying genetic cause of the disease. I think the FDA [U.S. Food and Drug Administration] is on board with this, but they aren’t going to come up with solutions. The drug developers have to do that.

MDF: What particular challenges do you see with drug development for DM?

KB: The clinical outcome measures used in this disease change very slowly, so you need long trials to measure decline. We need molecular markers, such as those reflecting splicing changes downstream of the mutant DMPK RNA that are linked to clinical changes. These are known as surrogate markers, and companies have to provide the data on these markers and clinical outcomes to the FDA.

MDF: What particular skills and insights will you bring to the MDF Scientific Advisory Committee?

KB: I plan to advise MDF on DM drug development and on incorporating science into drug development. I hope to help with encouraging and supporting new drug discovery and development programs for treatments for DM, advising on clinical trials, developing surrogate markers in DM, and having an effective working relationship with the FDA.

MDF SAC Member Profile: Dr. Laura Ranum

Published on Tue, 12/01/2015

MDF is pleased to welcome Dr. Laura Ranum, Ph.D., to its Scientific Advisory Committee (SAC). Dr. Ranum, who joined the SAC in summer 2015, is an internationally known investigator of disorders that result from repeat expansion mutations, such as those that cause type 1 and type 2 myotonic dystrophy (DM1 and DM2). More recently, she discovered that repeat expansion mutations can produce unexpected RNAs and proteins. These discoveries were big surprises and have changed the understanding of how expansion mutations work. 

Dr. Ranum received her Ph.D. in cell biology from the University of Minnesota in 1989 and carried out postdoctoral studies with Dr. Harry Orr in the Department of Laboratory Medicine and Pathology at that institution. In 1994, she joined the faculty of the University of Minnesota Department of Neurology as an assistant professor.

From 2003 to 2010 Dr. Ranum was a professor in the Department of Genetics, Cell Biology and Development at the University of Minnesota and the research director of the Paul and Sheila Wellstone Muscular Dystrophy Center.

In 2010 She moved to the University of Florida in Gainesville, to become the founding director of the Center for NeuroGenetics and a professor of Molecular Genetics and Microbiology and Neurology in the university’s College of Medicine. We spoke with Dr. Ranum in October 2015:

MDF: When did you first become interested in nucleotide repeat expansion disorders?

LR: I was working on spinocerebellar ataxia type 1 – SCA1 – as a postdoc in Harry Orr’s lab at the University of Minnesota. In 1993, we identified a CAG repeat expansion mutation as the cause of SCA1. That came on the heels of the 1992 identification of the CTG repeat expansion [on chromosome 19] as the cause of type 1 myotonic dystrophy -- DM1. DM1 was the third repeat expansion disorder to be identified. SCA1 was the fifth, after the triplet repeat identification in Huntington’s disease [HD], which was also in 1993.

It was all very exciting. We had suspected that SCA1 could be an expansion mutation, and it was. It was a very electric time. 

The first discussions of spinal-bulbar muscular atrophy [SBMA] and fragile X syndrome [two other triplet repeat expansion disorders] started to open up the possibility that variability in neurological diseases such as DM1 and SCA1 could be explained by the length of the repeat expansion. 

Curiously, the triplet repeat expansions for HD and SCA1, which are both dominant diseases, were in protein coding regions. But the expansion in DM1, which is also a dominant disease, was in an untranslated region of the gene, so it didn’t fit the same pattern.

MDF: When did you first become involved with the search for a second DM locus?

LR: That was probably in 1995 or so, shortly after I started as a faculty member in the Department of Neurology at the University of Minnesota. Dr. John Day, a neurologist there, was seeing a family in the clinic with DM but without the expected CTG expansion. John knew I had worked on SCA1, and we decided to work together [to identify the cause of this family’s disorder].

We began by collecting blood samples from a large family in Minnesota and mapped that gene to chromosome 3 in 1998. At a meeting in Naarden in the Netherlands, we began a collaboration with Dr. Kenneth Ricker, who was one of the first investigators to describe families from Germany who had DM but without the expected CTG expansion. I was interested in studying DNA samples from the additional families Dr. Ricker had collected because I thought that this would help us pinpoint and find the DM2 gene. So we expanded the project, with Dr. Ricker, to Germany.

In 2001, we published the identification of the gene defect in type 2 myotonic dystrophy – DM2. [The paper, Liquori et al., Science, Aug. 3, 2001, described the identification of the DM2 gene as a CCTG repeat in an intron of the ZNF9 gene on chromosome 3.]  We were very excited, and the scientific community as a whole was excited, that a CCTG tetranucleotide repeat located in an intron had been found to underlie DM2. The interpretation was that, because the DM1 and DM2 diseases were so similar and both were expansions in noncoding regions, these were both RNA gain-of-function disorders.

That was the interpretation at the time. We now have a collaborative Program Project grant [from the National Institutes of Health] to investigate RNA mechanisms and also to test if other mechanisms might be involved. Investigators on this multi-investigator grant include me, Dr. Maurice Swanson at the University of Florida, Dr. John Day at Stanford University, and Drs.Timothy Ebner and Brent Clark at the University of Minnesota.

MDF: So that 2001 paper gave a lot of support to the RNA toxic gain-of-function hypothesis for both forms of DM?

LR: Yes, especially after the findings that the CUGBP1 protein and the MBNL protein were affected by the DM1 and DM2 RNA expansions and that they in turn affected splicing of various genes.

MDF: When did you first begin to think about bidirectional transcription of expanded repeats?

LR: I had continued to work on SCA genes, and in 1999, we published that an untranslated CTG expansion underlies spinocerebellar ataxia type 8 -- SCA8. [See Koob et al., Nature Genetics, April 1999.] It was a controversial discovery, because the expansion mutation did not cause disease in all people who carried it.

Eventually, we developed a mouse model of SCA8 with the untranslated CTG expansion. The mice developed SCA8 disease features, but when we investigated the details, we found an unexpected result: In addition to the CUG expansion, there was a CAG expansion RNA made in the opposite direction, and it was translated into a polyglutamine expansion protein that accumulated in both our mouse model and human autopsy brains. We published that in 2006. [See Moseley et al., Nature Genetics, July 2006.]    

MDF: When did you first start to think about translation without the usual start codon?

LR: This discovery also came from our SCA8 work and was completely unexpected. To understand the contribution of the polyglutamine protein versus the CUG RNA in SCA8, we removed the ATG initiation codon. Surprisingly, we found that mutating the only ATG start codon did not, as had been expected, prevent polyglutamine from being made. At the time, the ATG initiation codon was thought to be essential to start translation and also that this start signal would ensure only one protein would be made. 

To make a long story short, we discovered in studies of cells that CUG and CAG expansion RNAs can make three different repeat expansion proteins each – meaning that, if a disease-causing expansion mutation expresses RNAs in both directions, up to six additional, unexpected proteins could be made. We named this novel type of protein production repeat-associated non-ATG translation, or RAN translation.

So, in SCA8, first we found a CUG expansion RNA. Then we found the gene mutation ran in both directions, producing CUG and CAG RNAs in both directions; and later, that each RNA can make three mutant proteins. It got really exciting, as we showed that these unexpected RAN proteins are made in mice and also in patients.

Initially we reported the discovery of RAN translation in SCA8 and in DM1. [See Zu et al., Proceedings of the National Academy of Sciences USA, Jan. 4, 2011.] We and others have now found RAN proteins in a growing number of additional expansion diseases including Huntington’s Disease [HD], C9ORF72 amyotrophic lateral sclerosis [ALS] and frontotemporal dementia [FTD], and in fragile X tremor ataxia syndrome [FXTAS].

Now we are investigating the impact of RAN translation in DM1 and DM2. We know DM1 can express a polyglutamine protein, but a lot of questions remain. How frequently is the polyglutamine protein found in patients? Are other RAN proteins also found in DM1? Does RAN translation also occur in DM2? Do RAN proteins substantially contribute to DM1 and DM2? We don’t yet know, but we’re working hard on these questions. 

MDF: Most therapy development in DM1 centers on antisense oligonucleotides to block or destroy the expanded CUG repeats in the DMPK RNA. If that were accomplished, could bidirectional transcription or RAN translation still have an effect on the disease course? Is getting rid of the CUG RNA expansion enough to treat the disease?

LR: An antisense oligo, such as Ionis Pharmaceutical's DMPKRx, is a great idea because it is designed to destroy the CUG RNA, and this would also get rid of any possible CUG RAN proteins. I am hopeful that this will be enough to make a big impact on the disease. But there could still be additional problems caused by remaining RNA and proteins not removed by the drug, such as CAG RNA [resulting from bidirectional transcription of the CTG repeat] and RAN proteins. We don’t yet know the impact that the CAG RNAs or RAN proteins have on DM1 at this point, but we’re working hard on this problem and will need to keep this in mind.

MDF: Is there a mouse model for DM2?

LR: Yes. We’ve developed a mouse model of DM2 and presented it at IDMC 10 [the 10th International Myotonic Dystrophy Consortium, held in Paris in June 2015]. The model overexpresses CCUG RNA conditionally. We’re working on publishing this DM2 mouse model.

MDF: What special contributions do you expect to make to the MDF Scientific Advisory Committee?

LR: I have a lot of research experience in DM1 and DM2 and a broad perspective from working on these and other expansion diseases. There’s a lot you can learn from looking across diseases, and I can bring this perspective to the table.

Benefit/Risk Study Results: Focus on Muscle Weakness

Published on Mon, 11/16/2015

As part of our investment in the development of effective treatments for myotonic dystrophy, we are trying to better understand how people with DM weigh the benefits of new treatments against the risks.  To do this, we worked with a company called Silicon Valley Research Group to develop a survey that presented a series of hypothetical new treatments and asked that people choose the side-effects that concerned them the most and the least for.  This type of analysis is called “Max-Diff Analysis” or sometimes “Best-Worst Scaling” and has been used in other benefit-risk studies and by the Food and Drug Administration (FDA).  The method generates robust statistics to determine, on average, what risks people are or are not willing to accept for a given benefit.  The FDA has indicated that it is very interested in this type of information.  

The survey showed that reversing, stopping or slowing the progression of muscle weakness were the most preferred benefits, in that order.  The side effects people were most willing to tolerate overall for any benefit were loss of appetite and a small increase in tiredness. 

People in the study also completed the short version of the Myotonic Dystrophy Health Index (MDHI) to rate the severity of their myotonic dystrophy.  Scores were grouped into mild, moderate and severe categories.  For the majority of benefits, those with all levels of severity were similar in their willingness to tolerate side effects except that those with more severe myotonic dystrophy were less willing to risk liver failure for any type of therapeutic benefit.  Also, those with the highest severity rating for their myotonic dystrophy were more willing to tolerate an increase in tiredness if the drug could stop or reduce myotonia.  The data reported here are based on the survey responses from those with DM1.  The responses from those with DM2 are being analyzed now.

These results were presented on September 17th at the MDF-sponsored regulatory workshop on therapeutic development for myotonic dystrophy, which was attended by FDA staff.  Next steps will likely include an in-depth follow-on study that looks at the benefit-risk preferences of caregivers and younger people with myotonic dystrophy.  We are also investigating ways to collect “qualitative” data, such as stories and open-ended comments, on the benefit-risk preferences of those with myotonic dystrophy.  Ultimately this information will be made available to FDA reviewers through various mechanisms with the goal of incorporating the view of those with myotonic dystrophy and their families into the decision-making process about new therapies.